Dr. Maude David, Assistant Professor

Office 534 Nash Hall
Phone 541-737-0629
FAX 541-737-0496
Email maude.david@oregonstate.edu
Education           
Ph.D. Ecole Centrale de Lyon, U. of Lyon, France

Research Interests:  Microbiology, Bioinformatics, Bioremediation

Courses Taught

RESEARCH

 

 

SELECTED PUBLICATIONS

Myrold, D.D., Prestat, E., David, M.M., and Hultman, J.  2017.  FOAM Functional Ontology Assignments_Supplementary Data.

Myrold, D.D., Prestat, E., David, M.M., and Hultman, J.  2017.  FOAM Functional Ontology Assignments

Diaz-Beltran, L., Esteban, F.J., Varma, M., Ortuzk, A., David, M. and Wall, D.P.  2017.  Cross-disorder comparative analysis of comorbid conditions reveals novel autism candidate genes.  BMC Genomics 19(1):315.

David, M.M., abineau, B.A. and Wall, D.P.  2016.  Can we accelerate autism discoveries through crowdsourcing?  Res. in Autism Spectrum Disorders 32:80-83.

David, M.M., Enard, D., Ozturk, A., Daniels, J., Jung, J.Y., Diaz-Beltran, L., and D.P. Wall.  2016.  Comorbid analysis of genes associated with autism spectrum disorders reveals differential evolutionary constraints.  2016.  PloS ONE 11(7)e0157937.

David, M.M., Cecillon, S., Warne, B., Prestat, E., Jansson, J.K., and Vogel, T.M.  2015.  Microbial ecology of chlorinated solvent biodegradation.  Environ. Microbiol. 17(12):4835-4850.

Hultman, J., Waldrop, M.P., Mackelprang, R., David, M., and McFarland, J.  2015.  Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes.  Nature 521(7551):208-212.

Sochat, V., David, M., and Wall, D.P.  2015.  Translational meta-analytical methods to localize the regulatory patterns of neurological disorders in the human brain.  AMIA Ann. Symp. Proc. 2015, 2073.

Myrold, D.D., Prestat, E., David, M.M., and Hultman, J.  2014.  FOAM (Functional Ontology Assignments for Metagenomes):  A hidden Markov Model (HMM) database with environmental focus. 

Prestat, E., David, M.M., Hultman, J., Tas, N., Lamendella, R., and Dvornik, J.  2014.  FOAM (Functional Ontology Assignments for Metagenomes):  A hidden Markov Model (HMM) database with environmental focus. Nucleic Acids Res. 42(10):e145-e145.

Myrold, D.D., Bottomley, P.J., Jumpponen, A., Rice, C.W., Zeglin, L.H. and David, M.M.  2014.  Unveiling microbial carbon cycling processes in key U.S. soils using "Omics.", OSU.

Myrold, D.D., David, M., Prestat, E., Zeglin, L., Bottomley, P.J., Hettich, R. and Jansson, J.  2014.  Integrating omics to understand soil C cycling responses to precipitation variation.  410.

Bravo, D., Martin, G., David, M.M., Cailleau, G., Verrecchia, E. and Junier, P.  Identifcation of active oxalotrophic bacteria by Bromodeoxyuridine DNA labeling in a microcosm soil experiment.  2013.  FEMS Microbiol. Letts. 348(2):103-111.

Nicora, C.D., Anderso, B.J., CAllister, S.J., Norbeck, A.D., and Purvine, S.O.  2013.  Amino acid treatment enhances protein recovery from sediment and soils for metaproteomic studies.  Proteomics 13(18-19):2776-2785.

Jumpponen, A., Zeglin, L., Prestate, E., David, M., Brown, S., and Dvornik, J.  2013.  Fungal community responses to discrete precipitation pulses under altered rainfall intervals.  Phytopathol. 103(6S).

Dugat-Bony, E., Biderre-Petit, C., Jaziri, F., David, M.M., Denonfoux, J., and Lyon, D.Y.  2013.  In situ TCE degradation mediated by complex dehalorespiring communities during biostimulation proceses.  Microb. Biotechnol. 5(5):642-653.

Baelum, J., Prestat, E., David, M.M., Strobel, B.W., and Jacobsen, C.S.  2012.  Modeling of phenoxy acid herbicide mineralization and growth of microbial degraders in 15 soils  monitored by quantitative real-time PCR of the functional tfdA gene.  Appl. and Environ. Microbiol. 78(15):5303-5312.

David, M.M., Cecillon, S., Fujita, Y. and Vogel, T.M.  2012.  From biogeochemistry to metagenomics, the search for undeerstanding of chlorinated compound biodegradation.  Abst. of Perpers of the Am. Chem. Soc. 243.

Mackelprang, R., Waldrop, M.P., DeAngelis, K.M., David, M.M., and Chavarria, K.L.  2011.  Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw.  Nature 480 (7377):368-371.

Zeglin, L.H. David, M., Bottomley, P., Hettich, R.L., Jansson, J., and Jumpponen, A.  2011.  Microbial response to modified precipitation patterns in tallgrass prairie soil:  molecular mechansism, activity rates and organic matter dynamics. 

Demanèche, S., Philippot, L., David, M.M., Navarro, E., Vogel, T.M.  20XX.  Characterization of denitrification gene clusters of soil bacteria via a metagenomic approach.  Appl. and Environ. Microbiol. 75(2):534-537.